Transcript: LINC02089:4

Basic information

LNCipedia transcript ID: LINC02089:4 
LNCipedia gene ID: LINC02089
Location (hg19): chr17:50939480-50976948
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 685 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT054767; FPKM1_group_12969_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.1137 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02089:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC102948.1.1-2:2
4.0 lnc-AC102948.1.1-2:2
4.1 lnc-AC102948.1.1-2:2
5.0 lnc-AC102948.1.1-2:2
5.1 LINC02089:2
5.2 LINC02089:4