Transcript: LINC02104:20

Basic information

LNCipedia transcript ID: LINC02104:20 
HGNC Gene Symbol: LINC02104    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2104
Ensembl Gene ID: ENSG00000271334
Ensembl Transcript ID: ENST00000603514
Location (hg19): chr5:39521621-39524805
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 550 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT101133; ENST00000603514.1
Alternative gene names: ENSG00000271334.1; CTD-2078B5.2; ENSG00000271334.5; LINC02104


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.007 non-coding 
CPAT coding probability 5.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02104:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OSMR-1:5
4.0 lnc-OSMR-1:5
4.1 lnc-OSMR-1:5
5.0 lnc-OSMR-1:5
5.1 LINC02104:10
5.2 LINC02104:20