Transcript: LINC02105:5

Basic information

LNCipedia transcript ID: LINC02105:5 
HGNC Gene Symbol: LINC02105    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2105
Ensembl Gene ID: ENSG00000250447
Ensembl Transcript ID: ENST00000504552
Location (hg19): chr5:53072474-53115516
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1003 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000504552; ENST00000504552.1; CTD-2081C10.1-001; OTTHUMT00000368422.1; NONHSAT101433; ENST00000504552.5
Alternative gene names: ENSG00000250447; CTD-2081C10.1; ENSG00000250447.1; OTTHUMG00000162282.1; ENSG00000250447.5; LINC02105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.7676 non-coding 
CPAT coding probability 13.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02105:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARL15-1:1
3.1 lnc-ARL15-1:1
4.0 lnc-ARL15-1:1
4.1 lnc-ARL15-1:1
5.0 lnc-ARL15-1:1
5.1 LINC02105:2
5.2 LINC02105:5