Transcript: LINC02115:5

Basic information

LNCipedia transcript ID: LINC02115:5 
HGNC Gene Symbol: LINC02115    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2115
Ensembl Gene ID: ENSG00000248757
Ensembl Transcript ID: ENST00000503367
RefSeq ID: NR_104670
Location (hg19): chr5:102864135-102877686
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 432 bp
Exons: 5
Sources: Refseq - Dec 2014; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104670; ENST00000503367.2; NR_104670.1
Alternative gene names: ENSG00000248757.2; CTD-2193G5.1; LINC02115; LOC102467212


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.4907 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02115:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NUDT12-1:2
4.0 lnc-NUDT12-1:2
4.1 lnc-NUDT12-1:2
5.0 lnc-NUDT12-1:2
5.1 LINC02115:3
5.2 LINC02115:5