Transcript: LINC02124:3

Basic information

LNCipedia transcript ID: LINC02124:3 
HGNC Gene Symbol: LINC02124    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2124
Ensembl Gene ID: ENSG00000259947
Ensembl Transcript ID: ENST00000570087
Location (hg19): chr16:1939115-1940435
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 484 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000570087.1; XX-DJ76P10__A.2-001; OTTHUMT00000433903.1; NONHSAT052021
Alternative gene names: ENSG00000259947.1; XX-DJ76P10__A.2; OTTHUMG00000176814.1; LINC02124


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.8204 non-coding 
CPAT coding probability 2.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02124:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAHD1-1:1
4.0 lnc-FAHD1-1:1
4.1 lnc-FAHD1-1:1
5.0 lnc-FAHD1-1:1
5.1 LINC02124:2
5.2 LINC02124:3