Transcript: LINC02127:11

Basic information

LNCipedia transcript ID: LINC02127:11 
HGNC Gene Symbol: LINC02127    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2127
Ensembl Gene ID: ENSG00000261637
Ensembl Transcript ID: ENST00000563826
RefSeq ID: NR_110913
Location (hg19): chr16:51051669-51069688
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 437 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000563826.1; RP11-883G14.2-001; OTTHUMT00000422678.1; NR_110913; NR_110913.1
Alternative gene names: ENSG00000261637.1; RP11-883G14.2; OTTHUMG00000173284.1; ENSG00000261637.2; LINC02127; LOC101927334


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.6558 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02127:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-327F22.5.1-3:4
4.0 lnc-RP11-327F22.5.1-3:4
4.1 lnc-RP11-327F22.5.1-3:4
5.0 lnc-RP11-327F22.5.1-3:4
5.1 LINC02127:6
5.2 LINC02127:11