Transcript: LINC02137:6

Basic information

LNCipedia transcript ID: LINC02137:6 
HGNC Gene Symbol: LINC02137    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2137
Ensembl Gene ID: ENSG00000260186
Ensembl Transcript ID: ENST00000562322
Location (hg19): chr16:58455230-58470073
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 538 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000562322.1; RP11-481J2.2-003; OTTHUMT00000429884.1; NONHSAT142838
Alternative gene names: ENSG00000260186.1; RP11-481J2.2; OTTHUMG00000175407.1; ENSG00000260186.5; LINC02137


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.9386 non-coding 
CPAT coding probability 3.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02137:6 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDRG4-1:1
4.0 lnc-NDRG4-1:1
4.1 lnc-NDRG4-1:1
5.0 lnc-NDRG4-1:1
5.1 LINC02137:2
5.2 LINC02137:6