Transcript: LINC02141:4

Basic information

LNCipedia transcript ID: LINC02141:4 
LNCipedia gene ID: LINC02141
Location (hg19): chr16:59889257-60087875
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6584 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014
Alternative transcript names: ENST00000568279.1; RP11-430C1.1-001; OTTHUMT00000422126.1; NONHSAT142895; NR_110917
Alternative gene names: ENSG00000261807.1; RP11-430C1.1; OTTHUMG00000173092.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.5796 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02141:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SETD6-2:1
4.0 lnc-SETD6-2:1
4.1 lnc-SETD6-2:1
5.0 lnc-SETD6-2:1
5.1 LINC02141:2
5.2 LINC02141:4