Transcript: LINC02147:9

Basic information

LNCipedia transcript ID: LINC02147:9 
LNCipedia gene ID: LINC02147
Location (hg19): chr5:117260715-117542631
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 329 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010073; NONHSAT103392
Alternative gene names: XLOC_004524; linc-DMXL1-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.9353 non-coding 
CPAT coding probability 7.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02147:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DMXL1-4:2
3.1 lnc-DMXL1-4:2
4.0 lnc-DMXL1-4:2
4.1 lnc-DMXL1-4:2
5.0 lnc-DMXL1-4:2
5.1 LINC02147:4
5.2 LINC02147:9