Transcript: LINC02158:9

Basic information

LNCipedia transcript ID: LINC02158:9 
LNCipedia gene ID: LINC02158
Location (hg19): chr3:42812092-42819775
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5557 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225611.1|HBMT00000970747.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.365 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02158:9 no no no no

Available literature

  1. Lin (2016), Primate-specific oestrogen-responsive long non-coding RNAs regulate proliferation and viability of human breast cancer cells., Open Biol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCBP2-3:4
5.0 lnc-CCBP2-3:4
5.1 LINC02158:3
5.2 LINC02158:9