Transcript: LINC02165:7

Basic information

LNCipedia transcript ID: LINC02165:7 
LNCipedia gene ID: LINC02165
Location (hg19): chr16:63764145-63765854
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 495 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024432; NONHSAT142949
Alternative gene names: XLOC_011750; linc-CDH5-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.1954 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02165:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDH5-6:1
3.1 lnc-CDH5-11:1
4.0 lnc-CDH5-11:1
4.1 lnc-CDH5-11:1
5.0 lnc-CDH5-11:1
5.1 LINC02165:3
5.2 LINC02165:7