Transcript: LINC02169:7

Basic information

LNCipedia transcript ID: LINC02169:7 
LNCipedia gene ID: LINC02169
Location (hg19): chr16:54279578-54304762
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 612 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024659; NONHSAT142598
Alternative gene names: XLOC_011946; linc-RPGRIP1L


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.745 non-coding 
CPAT coding probability 6.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02169:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-324D17.1.1-1:1
3.1 lnc-RP11-324D17.1.1-1:1
4.0 lnc-RP11-324D17.1.1-1:1
4.1 lnc-RP11-324D17.1.1-1:1
5.0 lnc-RP11-324D17.1.1-1:1
5.1 LINC02169:4
5.2 LINC02169:7