Transcript: LINC02169:8

Basic information

LNCipedia transcript ID: LINC02169:8 
HGNC Gene Symbol: LINC02169    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2169
Ensembl Gene ID: ENSG00000259517
Ensembl Transcript ID: ENST00000561336
Location (hg19): chr16:54279530-54304658
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 540 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000561336.2
Alternative gene names: ENSG00000259517.2; RP11-324D17.1; LINC02169


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.9555 non-coding 
CPAT coding probability 4.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02169:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-324D17.1.1-1:3
4.1 lnc-RP11-324D17.1.1-1:3
5.0 lnc-RP11-324D17.1.1-1:3
5.1 LINC02169:5
5.2 LINC02169:8