Transcript: LINC02173:13

Basic information

LNCipedia transcript ID: LINC02173:13 
LNCipedia gene ID: LINC02173
Location (hg19): chr4:107354683-107370249
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 401 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008864; NONHSAT097709
Alternative gene names: XLOC_003636; linc-SGMS2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -176.0785 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02173:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AIMP1-1:4
3.1 lnc-AIMP1-1:4
4.0 lnc-AIMP1-1:4
4.1 lnc-AIMP1-1:4
5.0 lnc-AIMP1-1:4
5.1 LINC02173:5
5.2 LINC02173:13