Transcript: LINC02175:22

Basic information

LNCipedia transcript ID: LINC02175:22 
LNCipedia gene ID: LINC02175
Location (hg19): chr16:25078359-25080275
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1799 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024246; NONHSAT141193
Alternative gene names: XLOC_011678; linc-LCMT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.1941 non-coding 
CPAT coding probability 3.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02175:22 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LCMT1-1:2
3.1 lnc-LCMT1-1:3
4.0 lnc-LCMT1-1:3
4.1 lnc-LCMT1-1:3
5.0 lnc-LCMT1-1:3
5.1 LINC02175:12
5.2 LINC02175:22