Transcript: LINC02175:3

Basic information

LNCipedia transcript ID: LINC02175:3 
LNCipedia gene ID: LINC02175
RefSeq ID: NR_135196
Location (hg19): chr16:25078208-25080276
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1951 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135196.1
Alternative gene names: LOC283887


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.1941 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02175:3 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC02175:3
5.1 LINC02175:3
5.2 LINC02175:3