Transcript: LINC02188:10

Basic information

LNCipedia transcript ID: LINC02188:10 
LNCipedia gene ID: LINC02188
Location (hg19): chr16:86750479-86768482
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 366 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024497; NONHSAT144235
Alternative gene names: XLOC_011816; linc-MAP1LC3B-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.1722 non-coding 
CPAT coding probability 9.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02188:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXL1-2:1
3.1 lnc-FOXL1-3:1
4.0 lnc-FOXL1-3:1
4.1 lnc-FOXL1-3:1
5.0 lnc-FOXL1-3:1
5.1 LINC02188:2
5.2 LINC02188:10