Transcript: LINC02197:8

Basic information

LNCipedia transcript ID: LINC02197:8 
LNCipedia gene ID: LINC02197
RefSeq ID: NR_134268
Location (hg19): chr5:70647682-70742163
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2597 bp
Exons: 3
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT102012; NR_134268.1
Alternative gene names: LOC102724392


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.7436 non-coding 
CPAT coding probability 4.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02197:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTF2H2-3:3
4.0 lnc-GTF2H2-3:3
4.1 lnc-GTF2H2-3:3
5.0 lnc-GTF2H2-3:3
5.1 LINC02197:5
5.2 LINC02197:8