Transcript: LINC02200:7

Basic information

LNCipedia transcript ID: LINC02200:7 
LNCipedia gene ID: LINC02200
RefSeq ID: NR_104672
Location (hg19): chr5:111964133-111966618
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 832 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104672; NR_104672.1
Alternative gene names: LOC102467214


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.4359 non-coding 
CPAT coding probability 3.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02200:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APC-1:4
4.0 lnc-APC-1:4
4.1 lnc-APC-1:4
5.0 lnc-APC-1:4
5.1 LINC02200:3
5.2 LINC02200:7