Transcript: LINC02207:11

Basic information

LNCipedia transcript ID: LINC02207:11 
HGNC Gene Symbol: LINC02207    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2207
Ensembl Gene ID: ENSG00000258476
Ensembl Transcript ID: ENST00000554530
Location (hg19): chr15:94406338-94421585
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1256 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000554530; ENST00000554530.1; RP11-76E17.3-001; OTTHUMT00000415171.1; NONHSAT050136; ENST00000554530.5
Alternative gene names: ENSG00000258476; RP11-76E17.3; ENSG00000258476.1; OTTHUMG00000171799.1; ENSG00000258476.5; LINC02207


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.486 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02207:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MCTP2-4:1
3.1 lnc-MCTP2-6:1
4.0 lnc-MCTP2-6:1
4.1 lnc-MCTP2-6:1
5.0 lnc-MCTP2-6:1
5.1 LINC02207:5
5.2 LINC02207:11