Transcript: LINC02208:21

Basic information

LNCipedia transcript ID: LINC02208:21 
LNCipedia gene ID: LINC02208
Location (hg19): chr5:117810057-117897818
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 732 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011021; NONHSAT103399
Alternative gene names: XLOC_004965; linc-SEMA6A-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.2619 non-coding 
CPAT coding probability 4.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02208:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DTWD2-2:2
3.1 lnc-DTWD2-3:2
4.0 lnc-DTWD2-3:2
4.1 lnc-DTWD2-3:2
5.0 lnc-DTWD2-3:2
5.1 LINC02208:4
5.2 LINC02208:21