Transcript: LINC02213:7

Basic information

LNCipedia transcript ID: LINC02213:7 
HGNC Gene Symbol: LINC02213    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2213
Ensembl Gene ID: ENSG00000249160
Ensembl Transcript ID: ENST00000506021
Location (hg19): chr5:10505108-10509306
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 774 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000506021.4
Alternative gene names: ENSG00000249160.4; RP11-1C1.5; LINC02213


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.7888 non-coding 
CPAT coding probability 4.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02213:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-1C1.5.1-3:2
4.1 lnc-RP11-1C1.5.1-3:2
5.0 lnc-RP11-1C1.5.1-3:2
5.1 LINC02213:4
5.2 LINC02213:7