Transcript: LINC02217:26

Basic information

LNCipedia transcript ID: LINC02217:26 
LNCipedia gene ID: LINC02217
Location (hg19): chr5:17404039-17430385
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1299 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT100631; FPKM1_group_25017_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.5207 non-coding 
CPAT coding probability 12.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02217:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BASP1-3:13
4.0 lnc-BASP1-3:13
4.1 lnc-BASP1-3:13
5.0 lnc-BASP1-3:13
5.1 LINC02217:3
5.2 LINC02217:26