Transcript: LINC02217:37

Basic information

LNCipedia transcript ID: LINC02217:37 
LNCipedia gene ID: LINC02217
Location (hg19): chr5:17404213-17442654
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1703 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009886; NONHSAT100635
Alternative gene names: XLOC_004308; linc-PRDM9-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.3772 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02217:37 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BASP1-2:5
3.1 lnc-BASP1-3:5
4.0 lnc-BASP1-3:5
4.1 lnc-BASP1-3:5
5.0 lnc-BASP1-3:5
5.1 LINC02217:14
5.2 LINC02217:37