Transcript: LINC02221:9

Basic information

LNCipedia transcript ID: LINC02221:9 
LNCipedia gene ID: LINC02221
Location (hg19): chr5:9854860-9857700
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 230 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010622; NONHSAT100388
Alternative gene names: XLOC_004290; linc-CCT5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.67 non-coding 
CPAT coding probability 2.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02221:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCT5-2:3
3.1 lnc-CCT5-3:3
4.0 lnc-CCT5-3:3
4.1 lnc-CCT5-3:3
5.0 lnc-CCT5-3:3
5.1 LINC02221:5
5.2 LINC02221:9