Transcript: LINC02226:22

Basic information

LNCipedia transcript ID: LINC02226:22 
HGNC Gene Symbol: LINC02226    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2226
Ensembl Gene ID: ENSG00000245729
Ensembl Transcript ID: ENST00000501071
Location (hg19): chr5:8333594-8457671
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1587 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000501071.2
Alternative gene names: ENSG00000245729.2; RP11-480D4.1; LINC02226


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.6043 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02226:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FASTKD3-1:7
4.1 lnc-FASTKD3-1:7
5.0 lnc-FASTKD3-1:7
5.1 LINC02226:11
5.2 LINC02226:22