Transcript: LINC02226:23

Basic information

LNCipedia transcript ID: LINC02226:23 
LNCipedia gene ID: LINC02226
Ensembl Gene ID: ENSG00000249159
Ensembl Transcript ID: ENST00000607662
Location (hg19): chr5:8446214-8457645
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 397 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607662.1
Alternative gene names: ENSG00000249159.2; RP11-480D4.2; ENSG00000249159.6; AC091965.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.8073 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02226:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FASTKD3-1:6
4.0 lnc-FASTKD3-1:6
4.1 lnc-FASTKD3-1:6
5.0 lnc-FASTKD3-1:6
5.1 LINC02226:12
5.2 LINC02226:23