Transcript: LINC02227:4

Basic information

LNCipedia transcript ID: LINC02227:4 
LNCipedia gene ID: LINC02227
Location (hg19): chr5:157747712-157836781
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3727 bp
Exons: 7
Sources: Refseq - Dec 2014
Alternative transcript names: NR_109888
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.224 non-coding 
CPAT coding probability 3.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02227:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EBF1-8:1
4.0 lnc-EBF1-8:1
4.1 lnc-EBF1-8:1
5.0 lnc-EBF1-8:1
5.1 LINC02227:2
5.2 LINC02227:4