Transcript: LINC02232:26

Basic information

LNCipedia transcript ID: LINC02232:26 
LNCipedia gene ID: LINC02232
Location (hg19): chr4:65842699-65890136
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 930 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000072675.1|FTMT21300035514.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.1649 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02232:26 no no no no

Available literature

  1. Lanzós (2017), Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EPHA5-1:11
5.0 lnc-EPHA5-1:11
5.1 LINC02232:10
5.2 LINC02232:26