Transcript: LINC02237:15

Basic information

LNCipedia transcript ID: LINC02237:15 
LNCipedia gene ID: LINC02237
Location (hg19): chr8:112392832-112393097
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 266 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT128327
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.1651 non-coding 
CPAT coding probability 10.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02237:15 no no no no

Available literature

  1. Lanzós (2017), Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-422N16.3.1-4:4
4.0 lnc-RP11-422N16.3.1-4:4
4.1 lnc-RP11-422N16.3.1-4:4
5.0 lnc-RP11-422N16.3.1-4:4
5.1 LINC02237:4
5.2 LINC02237:15