Transcript: LINC02243:6

Basic information

LNCipedia transcript ID: LINC02243:6 
LNCipedia gene ID: LINC02243
Location (hg19): chrX:134083560-134087412
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 980 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236091.1|ENST00000441841.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.6908 non-coding 
CPAT coding probability 12.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02243:6 no no no no

Available literature

  1. Cheng (2017), Identification of long noncoding RNAs for the detection of early stage lung squamous cell carcinoma by microarray analysis., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CXorf69-1:3
5.0 lnc-CXorf69-1:3
5.1 LINC02243:3
5.2 LINC02243:6