Transcript: LINC02252:7

Basic information

LNCipedia transcript ID: LINC02252:7 
HGNC Gene Symbol: LINC02252    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2252
Ensembl Gene ID: ENSG00000261304
Ensembl Transcript ID: ENST00000565706
Location (hg19): chr15:34943336-34947965
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 487 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565706.1; CTD-2125J1.1-001; OTTHUMT00000422970.1; NONHSAT041599
Alternative gene names: ENSG00000261304.1; CTD-2125J1.1; OTTHUMG00000173391.1; LINC02252


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.4343 non-coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02252:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GOLGA8A-1:2
4.0 lnc-GOLGA8B-2:3
4.1 lnc-GOLGA8B-2:3
5.0 lnc-GOLGA8B-2:3
5.1 LINC02252:4
5.2 LINC02252:7