Transcript: LINC02273:10

Basic information

LNCipedia transcript ID: LINC02273:10 
HGNC Gene Symbol: LINC02273    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2273
Ensembl Gene ID: ENSG00000245954
Ensembl Transcript ID: ENST00000509332
Location (hg19): chr4:153021906-153025384
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 767 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007661; ENST00000509332; ENST00000509332.1; RP11-18H21.1-002; OTTHUMT00000365856.1; NONHSAT098783; ENST00000509332.5
Alternative gene names: XLOC_003738; linc-ARFIP1-4; ENSG00000245954; RP11-18H21.1; ENSG00000245954.2; OTTHUMG00000161715.1; ENSG00000245954.6; LINC02273


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -209.4659 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02273:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM160A1-5:1
3.1 lnc-FAM160A1-6:1
4.0 lnc-FAM160A1-6:1
4.1 lnc-FAM160A1-6:1
5.0 lnc-FAM160A1-6:1
5.1 LINC02273:4
5.2 LINC02273:10