Transcript: LINC02280:17

Basic information

LNCipedia transcript ID: LINC02280:17 
LNCipedia gene ID: LINC02280
Location (hg19): chr14:105111662-105122019
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 257 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022895; NONHSAT040265
Alternative gene names: XLOC_011149; linc-TMEM179


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02280:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM179-1:2
3.1 lnc-TMEM179-2:2
4.0 lnc-TMEM179-2:2
4.1 lnc-TMEM179-2:2
5.0 lnc-TMEM179-2:2
5.1 LINC02280:8
5.2 LINC02280:17