Transcript: LINC02288:19

Basic information

LNCipedia transcript ID: LINC02288:19 
HGNC Gene Symbol: LINC02288    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2288
Ensembl Gene ID: ENSG00000246548
Ensembl Transcript ID: ENST00000500215
Location (hg19): chr14:77507407-77535846
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2924 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500215; TCONS_00022395; NONHSAT037949; ENST00000500215.3
Alternative gene names: ENSG00000246548; XLOC_010882; linc-KIAA1737-1; ENSG00000246548.3; RP11-7F17.5; LINC02288


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.4764 non-coding 
CPAT coding probability 20.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02288:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA1737-1:1
3.1 lnc-KIAA1737-1:1
4.0 lnc-KIAA1737-1:1
4.1 lnc-KIAA1737-1:1
5.0 lnc-KIAA1737-1:1
5.1 LINC02288:14
5.2 LINC02288:19