Transcript: LINC02288:20

Basic information

LNCipedia transcript ID: LINC02288:20 
LNCipedia gene ID: LINC02288
Location (hg19): chr14:77507407-77535846
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2921 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000500215; ENST00000500215.2; RP11-7F17.5-001; OTTHUMT00000414299.1; NONHSAT037950
Alternative gene names: ENSG00000246548; RP11-7F17.5; ENSG00000246548.2; OTTHUMG00000171579.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.4764 non-coding 
CPAT coding probability 20.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02288:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA1737-1:2
3.1 lnc-KIAA1737-1:2
4.0 lnc-KIAA1737-1:2
4.1 lnc-KIAA1737-1:2
5.0 lnc-KIAA1737-1:2
5.1 LINC02288:15
5.2 LINC02288:20