Transcript: LINC02289:27

Basic information

LNCipedia transcript ID: LINC02289:27 
LNCipedia gene ID: LINC02289
Location (hg19): chr14:77507350-77552800
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 470 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022802; NONHSAT037947
Alternative gene names: XLOC_011080; linc-C14orf4-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -184.5056 non-coding 
CPAT coding probability 6.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02289:27 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IRF2BPL-2:1
3.1 lnc-IRF2BPL-2:1
4.0 lnc-IRF2BPL-2:1
4.1 lnc-IRF2BPL-1:10
5.0 lnc-IRF2BPL-1:10
5.1 LINC02289:4
5.2 LINC02289:27