Transcript: LINC02289:31

Basic information

LNCipedia transcript ID: LINC02289:31 
LNCipedia gene ID: LINC02289
Location (hg19): chr14:77514516-77547598
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 364 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022376; NONHSAT140172
Alternative gene names: XLOC_011080; linc-C14orf4-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.5889 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02289:31 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IRF2BPL-2:4
3.1 lnc-IRF2BPL-2:4
4.0 lnc-IRF2BPL-2:4
4.1 lnc-IRF2BPL-1:14
5.0 lnc-IRF2BPL-1:14
5.1 LINC02289:8
5.2 LINC02289:31