Transcript: LINC02289:36

Basic information

LNCipedia transcript ID: LINC02289:36 
LNCipedia gene ID: LINC02289
Location (hg19): chr14:77540152-77542534
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 713 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023135; NONHSAT037956
Alternative gene names: XLOC_011081; linc-C14orf4-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.0928 non-coding 
CPAT coding probability 3.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02289:36 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IRF2BPL-1:4
3.1 lnc-IRF2BPL-1:4
4.0 lnc-IRF2BPL-1:4
4.1 lnc-IRF2BPL-1:4
5.0 lnc-IRF2BPL-1:4
5.1 LINC02289:13
5.2 LINC02289:36