Transcript: LINC02289:40

Basic information

LNCipedia transcript ID: LINC02289:40 
LNCipedia gene ID: LINC02289
Location (hg19): chr14:77535523-77542532
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1815 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258819.1|ENST00000557526.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.7578 non-coding 
CPAT coding probability 2.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02289:40 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IRF2BPL-1:22
5.0 lnc-IRF2BPL-1:22
5.1 LINC02289:17
5.2 LINC02289:40