Transcript: LINC02293:17

Basic information

LNCipedia transcript ID: LINC02293:17 
LNCipedia gene ID: LINC02293
Location (hg19): chr14:27278586-27289851
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 840 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022446; NONHSAT036119
Alternative gene names: XLOC_010778; linc-FOXG1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.9253 non-coding 
CPAT coding probability 5.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02293:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXG1-5:2
3.1 lnc-FOXG1-5:3
4.0 lnc-FOXG1-5:3
4.1 lnc-FOXG1-5:3
5.0 lnc-FOXG1-5:3
5.1 LINC02293:6
5.2 LINC02293:17