Transcript: LINC02319:3

Basic information

LNCipedia transcript ID: LINC02319:3 
HGNC Gene Symbol: LINC02319    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2319
Ensembl Gene ID: ENSG00000258694
Ensembl Transcript ID: ENST00000555852
Location (hg19): chr14:52577840-52596343
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 349 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000555852; ENST00000555852.1; RP11-1033H12.1-001; OTTHUMT00000411611.1; NONHSAT036880
Alternative gene names: ENSG00000258694; RP11-1033H12.1; ENSG00000258694.1; OTTHUMG00000171087.1; LINC02319


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.3944 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02319:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NID2-1:1
3.1 lnc-NID2-3:1
4.0 lnc-NID2-3:1
4.1 lnc-NID2-3:1
5.0 lnc-NID2-3:1
5.1 LINC02319:2
5.2 LINC02319:3