Transcript: LINC02335:9

Basic information

LNCipedia transcript ID: LINC02335:9 
HGNC Gene Symbol: LINC02335    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2335
Ensembl Gene ID: ENSG00000278630
Ensembl Transcript ID: ENST00000616578
Location (hg19): chr13:55637080-55735625
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 659 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616578.1
Alternative gene names: ENSG00000278630.1; RP11-78L16.1; LINC02335


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -94.7823 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02335:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PRR20A-13:4
4.1 lnc-PRR20A-13:4
5.0 lnc-PRR20A-13:4
5.1 LINC02335:5
5.2 LINC02335:9