Transcript: LINC02345:21

Basic information

LNCipedia transcript ID: LINC02345:21 
LNCipedia gene ID: LINC02345
Location (hg19): chr15:38276967-38332682
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 641 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00023220
Alternative gene names: XLOC_011213; linc-SPRED1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -255.3896 non-coding 
CPAT coding probability 3.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02345:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMCO5A-1:4
3.1 lnc-TMCO5A-1:4
4.0 lnc-TMCO5A-1:4
4.1 lnc-TMCO5A-1:4
5.0 lnc-TMCO5A-1:4
5.1 LINC02345:5
5.2 LINC02345:21