Transcript: LINC02345:22

Basic information

LNCipedia transcript ID: LINC02345:22 
HGNC Gene Symbol: LINC02345    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2345
Ensembl Gene ID: ENSG00000259225
Ensembl Transcript ID: ENST00000558081
Location (hg19): chr15:38276967-38333188
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1147 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000558081.2; RP11-1008C21.1-003; OTTHUMT00000418082.3; NONHSAT041696
Alternative gene names: ENSG00000259225.2; RP11-1008C21.1; OTTHUMG00000172364.3; ENSG00000259225.6; LINC02345


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.7062 non-coding 
CPAT coding probability 5.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02345:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMCO5A-1:5
4.0 lnc-TMCO5A-1:5
4.1 lnc-TMCO5A-1:5
5.0 lnc-TMCO5A-1:5
5.1 LINC02345:6
5.2 LINC02345:22