Transcript: LINC02366:8

Basic information

LNCipedia transcript ID: LINC02366:8 
HGNC Gene Symbol: LINC02366    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2366
Ensembl Gene ID: ENSG00000256888
Ensembl Transcript ID: ENST00000544815
Location (hg19): chr12:10921992-10930043
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 214 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000544815; ENST00000544815.1; RP13-81N3.2-002; OTTHUMT00000399902.1; NONHSAT026899; ENST00000544815.5
Alternative gene names: ENSG00000256888; RP13-81N3.2; ENSG00000256888.1; OTTHUMG00000168488.1; ENSG00000256888.5; LINC02366


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -292.6134 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02366:8 no no no no

Available literature

  1. van den Berg (2016), Meta-analysis of Genome-Wide Association Studies for Extraversion: Findings from the Genetics of Personality Consortium., Behav. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRH2-1:2
3.1 lnc-PRH2-1:2
4.0 lnc-PRH2-1:2
4.1 lnc-PRH2-1:2
5.0 lnc-PRH2-1:2
5.1 LINC02366:4
5.2 LINC02366:8