Transcript: LINC02374:8

Basic information

LNCipedia transcript ID: LINC02374:8 
HGNC Gene Symbol: LINC02374    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2374
Ensembl Gene ID: ENSG00000249747
Ensembl Transcript ID: ENST00000515222
Location (hg19): chr4:188123140-188130500
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 578 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007692; ENST00000515222; ENST00000515222.1; RP11-308K2.1-001; OTTHUMT00000360169.2; NONHSAT099684
Alternative gene names: XLOC_003825; linc-ZFP42-7; ENSG00000249747; RP11-308K2.1; ENSG00000249747.1; OTTHUMG00000160312.3; LINC02374


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.6964 non-coding 
CPAT coding probability 7.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02374:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZFP42-7:1
3.1 lnc-ZFP42-7:1
4.0 lnc-ZFP42-7:1
4.1 lnc-ZFP42-7:1
5.0 lnc-ZFP42-7:1
5.1 LINC02374:2
5.2 LINC02374:8