Transcript: LINC02377:9

Basic information

LNCipedia transcript ID: LINC02377:9 
HGNC Gene Symbol: LINC02377    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2377
Ensembl Gene ID: ENSG00000250102
Ensembl Transcript ID: ENST00000500169
Location (hg19): chr4:132301168-132449276
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 450 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500169.2; RP11-314N14.1-001; OTTHUMT00000363758.2; NONHSAT098312; ENST00000500169.6
Alternative gene names: ENSG00000250102.1; RP11-314N14.1; OTTHUMG00000161095.2; ENSG00000250102.5; LINC02377


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.9908 non-coding 
CPAT coding probability 17.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02377:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH10-7:1
4.0 lnc-PCDH10-7:1
4.1 lnc-PCDH10-7:1
5.0 lnc-PCDH10-7:1
5.1 LINC02377:4
5.2 LINC02377:9