Transcript: LINC02389:16

Basic information

LNCipedia transcript ID: LINC02389:16 
LNCipedia gene ID: LINC02389
Location (hg19): chr12:65277249-65294429
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 470 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00020454
Alternative gene names: XLOC_009787; linc-LEMD3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1134.1893 non-coding 
CPAT coding probability 2.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02389:16 no no no no

Available literature

  1. Lin (2014), Long noncoding RNA expression in dermal papilla cells contributes to hairy gene regulation., Biochem. Biophys. Res. Commun.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TBC1D30-1:2
3.1 lnc-TBC1D30-2:2
4.0 lnc-TBC1D30-2:2
4.1 lnc-TBC1D30-2:2
5.0 lnc-TBC1D30-2:2
5.1 LINC02389:4
5.2 LINC02389:16