Transcript: LINC02395:15

Basic information

LNCipedia transcript ID: LINC02395:15 
HGNC Gene Symbol: LINC02395    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2395
Ensembl Gene ID: ENSG00000257771
Ensembl Transcript ID: ENST00000546821
RefSeq ID: NR_110048
Location (hg19): chr12:50305736-50320122
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3157 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000546821; ENST00000546821.1; RP11-70F11.8-001; OTTHUMT00000405534.1; NONHSAT028154; NR_110048; ENST00000546821.5; NR_110048.1
Alternative gene names: ENSG00000257771; RP11-70F11.8; ENSG00000257771.1; OTTHUMG00000169708.2; ENSG00000257771.5; LINC02395; LOC101927292


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.3545 non-coding 
CPAT coding probability 3.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02395:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AQP2-1:3
3.1 lnc-AQP2-1:3
4.0 lnc-AQP2-1:3
4.1 lnc-AQP2-1:3
5.0 lnc-AQP2-1:3
5.1 LINC02395:4
5.2 LINC02395:15